Radiation Oncology

Milan Sonka, PhD


Co-director, Iowa Institute of Biomedical Imaging
Professor of Electrical & Computer Engineering
Professor of Radiation Oncology, Ophthalmology and Visual Sciences

Contact Information

Office: 4013 Seamans Center
Iowa City, IA 52242
Phone: 319-335-6052

Email: milan-sonka@uiowa.edu
Web: Profile at the College of Engineering


MS, Electrical Engineering, Technical Cybernetics, Czech Technical University of Prague, Czechoslovakia
PhD, Technical Cybernetics, Digital Image Analysis, Czech Technical University of Prague, Czechoslovakia

Center, Program and Institute Affiliations

Iowa Institute for Biomedical Imaging

Selected Publications

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Zhang H, Abiose A, Gupta D, Campbell D, Martins J, Sonka M, Wahle A.  Novel indices for left-ventricular dyssynchrony characterization based on highly automated segmentation from real-time 3-d echocardiography.  Ultrasound Med Biol;  2013.  Available from: http://www.ncbi.nlm.nih.gov/pubmed/23141901

Zhang L, Lee K, Niemeijer M, Mullins R, Sonka M, Abramoff M.  Automated Segmentation of the Choroid from Clinical SD-OCT.  Invest Ophthalmol Vis Sci.  2012 November 1. 53(12):7510-9.

Lee K, Kwon Y, Garvin M, Niemeijer M, Sonka M, Abramoff M.  Distribution of damage to the entire retinal ganglion cell pathway: quantified using spectral-domain optical coherence tomography analysis in patients with glaucoma.  Arch Ophthalmol.  2012 September 1. 1309(9):1118-26.

Chen X, Niemeijer M, Zhang L, Lee K, Abramoff M, Sonka M.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.  IEEE Trans Med Imaging.  2012 August. 31(8):1521-31.

Bauer C, Sun S, Sun W, Otis J, Wallace A, Smith B, Sunderland J, Graham M, Sonka M, Buatti J, Beichel R.  Automated measurement of uptake in cerebellum, liver, and aortic arch in full-body FDG PET/CT scans.  Med Phys.  2012 June. 39(6):3112-23.

van Dijk H, Verbraak F, Kok P, Stehouwer M, Garvin M, Sonka M, DeVries J, Schlingemann R, Abramoff M.  Early neurodegeneration in the retina of type 2 diabetic patients.  Invest Ophthalmol Vis Sci.  2012 May. 53(6):2715-9.

Garvin M, Abramoff M, Lee K, Niemeijer M, Sonka M, Kwon Y.  2-D pattern of nerve fiber bundles in glaucoma emerging from spectral-domain optical coherence tomography..  Invest Ophthalmol Vis Sci.  2012 January 31. 53(1):483-9.

Fedorov A, Beichel R, Kalpathy-Cramer J, Finet J, Fillion-Robin J, Pujol S, Bauer C, Jennings D, Fennessy F, Sonka M, Buatti J, Aylward S, Miller J, Pieper S, Kikinis R.  3D Slicer as an image computing platform for the Quantitative Imaging Network..  Magn Reson Imaging.  2012. 30(9):1323-41.

Kovarnik T, Mintz G, Skalicka H, Kral A, Horak J, Skulec R, Uhrova J, Martasek P, Downe R, Wahle A, Sonka M, Mrazek V, Aschermann M, Linhardt A.  Virtual histology evaluation of atherosclerosis regression during atorvastatin and ezetimibe administration: HEAVEN study.  Circ J.  2012. 76(1):176-83.

Antony B, Abramoff M, Tang L, Ramdas W, Vingerling J, Jansonius N, Lee K, Kwon Y, Sonka M, Garvin M.  Automated 3-D method for the correction of axial artifacts in spectral-domain optical coherence tomography images.  Biomed Opt Express.  2011 August 1. 2(8):2403-16.

Date Last Modified: 06/06/2016 - 13:17:48