MSTP Student Publications
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MSTP Students engage in a variety of research areas. Below are MSTP student publications sorted by students' last name, alphabetically by year of publication.
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2009
Ettinger NA, Duggal P, Braz RFS, Nascimento ET, Beaty TH, Jeronimo SMB, Pearson RD, Blackwell JM, Moreno L, Wilson ME.
Genetic Admixture in Brazilians Exposed to Infection with Leishmania chagasi. Annals of Human Genetics 2009.73:304–313. PMID: 19397557 -
Jongeling AC, Johns ME, Murphy AZ, Hammond DL.
Persistent inflammatory pain decreases the antinociceptive effects of the mu opioid receptor agonist DAMGO in the locus coeruleus of male rats. Neuropharmacology. 2009 Mar 3. [Epub ahead of print] PMID: 19265713 -
Khalsa SS, Rudrauf D, Sandesara C, Olshansky B, Tranel D.
Bolus isoproterenol infusions provide a reliable method for assessing interoceptive awareness.” Int J Psychophysiol. 2009. 72: 34-45. PMID: 18854201 -
Wirth TC, Pham NL, Harty JT, Badovinac VP.
High initial frequency of TCR-transgenic CD8 T cells alters inflammation and pathogen clearance without affecting memory T cell function. Molecular Immunology. 2009 Feb 3. [Epub ahead of print]. PMID: 19195704.Schulert GS, McCaffrey RL, Buchan BW, Lindemann SR, Hollenback C, Jones BD, Allen LA. Francisella tularensis genes required for inhibition of the neutrophil respiratory burst and intramacrophage growth identified by random transposon mutagenesis of strain LVS. Infect Immun. 2009.Apr;77(4):1324-36. PMID: 19204089
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Smith RJH, Sheffield AM, and Van Camp G, (updated April 2009)
Nonsyndromic Hearing Loss and Deafness; in GeneReviews at GeneTests: Medical Genetics Information Resource [database online]. Copyright, University of Washington, Seattle. 1997-2009 Available at http://www.genetests.org.Tabayoyong WB, Zavazava N.
Meet the inlaws: embryonic stem cell derivatives meet the immune system. Cell Research. Cell Res. 2009.19(4):397-8. PMID: 19339976Anghelina D, Zhao J, Trandem K, Perlman S.
Role of regulatory T cells in coronavirus-induced acute encephalitis. Virology. 2009 Mar 15;385(2):358-67. PMID: 19141357 -
Williams AJ, Knutson TM, Colomer Gould VF, Paulson HL.
In vivo suppression of polyglutamine neurotoxicity by C-terminus of Hsp70 interacting protein (CHIP) supports an aggregation model of pathogenesis. Neurobiol. Dis.,2009.33: 342-353 PMID: 19084066 -
Coryell MW, Wunsch AM, Haenfler JM, Allen JE, Schnizler M, Ziemann AE, Cook MN, Dunning JP, Price MP, Rainier JD, Liu Z, Light AR, Langbehn DR, Wemmie JA. 2009
Acid-sensing ion channel-1a in the amygdala, a novel therapeutic target in depression-related behavior. J Neurosci. 2009 Apr 29;29(17):5381-8. PMID: 19403806 -
2008
Boes A.D., Bechara A., Tranel D., Anderson S. W., Richman L., and Nopoulos P.
Right ventromedial prefrontal cortex: a neuroanatomical correlate of impulse control in boys. Social Cognitive and Affective Neuroscience. Soc Cogn Affect Neurosci. 2008 Oct 19.
Boes A.D., Tranel D., Anderson S.W., and Nopoulos P.
Right anterior cingulate cortex volume is a neuroanatomical correlate of aggression and defiance in boys. Behavioral Neuroscience, 2008;122(3):677-84.
Friemann, R, K Lee, EN Brown, DT Gibson, H Eklund, S Ramaswamy.
Structural basis for electron transfer in multicomponent Rieske non-heme iron toluene dioxygenase enzyme system (2008). Acta Crystallogr D Biol Crystallogr.
Brown, EN, R Friemann, A Karlsson, JV Parales, MMJ Couture, LD Eltis, and S Ramaswamy. Determining Rieske cluster reduction potentials. 2008; J Biol Inorg Chem 13, 1301
Brown, EN.
Removing bias from solvent atoms in electron density maps. 2008; J Applied Crystallography 41. 761-7
Chang M, Lim M, Cooper JD, Sleat DE, Cheng SH, Lobel P, Davidson BL.
Intraventricular enzyme replacement improves disease phenotypes in a mouse model of late infantile neuronal ceroid lipofuscinosis. Molecular Therapy. 2008;Apr;16(4):49-56.
Dickson, M,Tian X, Liu X, Davis D, Sigmund C.
Upstream Stimulatory Factor is Required for Human Angiotensinogen Expression and Differential Regulation by the A-20C Polymorphism. Circ Res 2008;103(9):940-7.
Ettinger NA, Wilson ME.
Macrophage and T-Cell Gene Expression in a Model of Early Infection with the Protozoan Leishmania chagasi. PLoS Negl Trop Dis. 2008 Jun 25;2(6):e252.
Bartlett JA, Fisher AJ, McCray PB Jr.
Innate immune functions of the airway epithelium. Contrib Microbiol. 2008;15:147-63.
Fischer AJ, Goss KL, Scheetz TE, Wohlford-Lenane CL, Snyder JM, McCray Jr PB.
Differential Gene Expression in Human Conducting Airway Surface Epithelia and Submucosal Glands. Am J Respir Cell Mol Biol. 2008 Aug 14.
Glasgow JM, Salem AK.
Stem Cells and Cancer, Encyclopedia of Stem Cell Research, Review. 2008.
Intra J., Glasgow J.M., Mai H.Q., Salem A.K..
Pulsatile release of DNA from polydimethylsiloxane (PDMS) chips with hydrolytically degradable seals, J. Controlled Release, 2008;127(3): 280-7.
Beyer AM, Baumbach GL, Halabi CM, Modrick ML, Lynch CM, Gerhold TD, Ghoneim SM, de Lange WJ, Keen HL, Tsai YS, Maeda N, Sigmund CD, Faraci FM.
Interference with PPARgamma signaling causes cerebral vascular dysfunction, hypertrophy, and remodeling. Hypertension. 2008 Apr;51(4):867-71.
Halabi CM, Beyer AM, de Lange WJ, Keen HL, Baumbach GL, Faraci FM, Sigmund CD.
Interference with PPAR gamma function in smooth muscle causes vascular dysfunction and hypertension. Cell Metab. 2008 Mar;7(3):215-26.
de Lange WJ ,Halabi CM, Beyer AM, Sigmund CD.
Germ line activation of the Tie2 and SMMHC promoters causes noncell-specific deletion of floxed alleles. Physiol Genomics. 2008 Sep 17;35(1):1-4.
Beyer AM, de Lange WJ, Halabi CM, Modrick ML, Keen HL, Faraci FM, Sigmund CD.
Endothelium-specific interference with peroxisome proliferator activated receptor gamma causes cerebral vascular dysfunction in response to a high-fat diet. Circ Res. 2008 Sep 12;103(6):654-61. Epub 2008 Jul 31.
Xiang J, McLinden JH, Chang Q, Jordan (Mohr) EL, Stapleton JT.
Characterization of a peptide domain within the GB virus C NS5A phosphoprotein that inhibits HIV replication. PLoS ONE. 2008 Jul 2;3(7):e2580.
Khalsa SS, Rudrauf D, Damasio AR, Davidson RJ, Lutz A, Tranel D.
Interoceptive awareness in experienced meditators. Psychophysiology. 2008.45(4):671-7. PMID: 18503485
Marden JJ, Zhang Y, Oakley FD, Zhou W, Lou M, Jia HP, McCray PB Jr, Yaniv M, Weitzmanm JB, Engelhardt JF.
JunD protects the liver from ischemia/reperfusion injury by dampening AP-1 transcriptional activation. J Biol Chem. 2008 Jan 8.
Khalsa SS, Rudrauf D, Sandesara C, Olshansky B, Tranel D.
Bolus isoproterenol infusions provide a reliable method for assessing interoceptive awareness. Int J Psychophysiol. 2008 Sep 27
Khalsa SS, Rudrauf D, Damasio AR, Davidson RJ, Lutz A, Tranel D.
Interoceptive awareness in experienced meditators.
Psychophysiology. 2008 Jul;45(4):671-7. Epub 2008 May 20.
Glenn, KA, Nelson RF, Wen H, Zhou Z, Paulson, HL.
Diversity in tissue expression, substrate binding, and SCF complex formation for a lectin family of ubiquitin ligases. J Biol Chem. 2008 May 9;283(19):12717-29.
Oakley FD, Abbott D, Li Q, Engelhardt J.
Signaling Components of Redox Active Endosomes: The Redoxosomes. Antioxid Redox Signal. 2008 Dec 11. PMID: 19072143
Marden JJ, Zhang Y, Oakley FD, Zhou W, Luo M, Jia HP, McCray PB Jr, Yaniv M, Weitzman JB, Engelhardt JF.
JunD protects the liver from ischemia/reperfusion injury by dampening AP-1 transcriptional activation. J Biol Chem. 2008 Mar 14;283(11):6687-95.
Peters AL, Plenge RM, Graham RR, Altshuler DM, Moser KL, Gaffney PM, and Bishop GA.
A novel polymorphism of the human CD40 receptor with enhanced function. Blood. 2008;112:1863-1871.
Ramme AJ, Devries N, Kallemeyn NA, Magnotta VA, Grosland NM.
Semi-automated Phalanx Bone Segmentation Using the Expectation Maximization Algorithm. J Digit Imaging. 2008 Sep 3
Gassman EE, Powell SM, Kallemeyn NA, Devries NA, Shivanna KH, Magnotta VA, Ramme AJ, Adams BD, Grosland NM.
Automated bony region identification using artificial neural networks: reliability and validation measurements. Skeletal Radiol. 2008 Apr;37(4):313-9.
Hildebrand MS, Newton SS, Gubbels SP, Sheffield AM, Kochhar A, de Silva MG, Dahl HH, Rose SD, Behlke MA, Smith RJ.
Advances in molecular and cellular therapies for hearing loss. Mol Ther. 2008;16(2):224-36.
Sprague DL, Elzey BD, Crist SA, Waldschmidt TJ, Jensen RJ, Ratliff TL.
Platelet-mediated modulation of adaptive immunity: unique delivery of CD154 signal by platelet-derived membrane vesicles. Blood. 2008 May 15;111(10):5028-36.
Crist SA, Sprague DL, Ratliff TL.
Nuclear factor of activated T cells (NFAT) mediates CD154 expression in megakaryocytes. Blood. 2008 Apr 1;111(7):3553-61.
Bonde S, Dowden A, Chan KM, Tabayoyong WB, Zavazava N.
HOXB4 but not BMP4 confers self-renewal properties to ES-derived hematopoietic progenitor cells. Transplantation. 2008.86(12):1803-9. PMID: 19104426
Zhuravleva MA, Trandem K, Sun PD.
Structural implications of Siglec-5-mediated sialoglycan recognition. J Mol Biol. 2008 Jan 11;375(2):437-47.
Wang SY, Weiner G
Complement and cellular cytotoxicity in antibody therapy of cancer. Expert Opin Biol Ther. 2008 Jun;8(6):759-68.
Harraz MM, Marden JJ, Zhou W, Zhang Y,Williams A, Sharov VS, Nelson K, Luo M, Paulson H, Schöneich C, Engelhardt JF.
SOD1 mutations disrupt redox-sensitive Rac regulation of NADPH oxidase in a familial ALS model. J Clin Invest. 2008;118: 659-670.
Winborn BJ, Travis SM, Todi SV, Scaglione KM, Xu P,Williams AJ, Cohen RE, Peng J, Paulson HL.
The deubiquitinating enzyme ataxin-3, a polyglutamine disease protein, edits Lys63-linkages in mixed linkage ubiquitin chains. J. Biol. Chem. 2008;283: 26436-26443.
Williams AJ, Paulson HL.
Polyglutamine neurodegeneration: protein misfolding revisited. Trends Neurosci. 2008 Oct;31(10):521-8. Epub 2008 Sep 6.
Ziemann AE, Schnizler MK, Albert GW, Severson MA, Howard Iii MA, Welsh MJ, Wemmie JA
Seizure termination by acidosis depends on ASIC1a. Nat Neurosci. 2008 Jul;11(7):816-22. Epub 2008 Jun 8.
2007
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Boes AD, McCormick LM, Coryell WH, Nopoulos P.
Rostral Anterior Cingulate Cortex Volume Correlates with Depressed Mood in Normal Healthy Children. Biol Psychiatry. 2007 Oct 2. -
Boes AD, Murko V, Wood JL, et al.
Social function in boys with cleft lip and palate: relationship to ventral frontal cortex morphology. Behavioural Brain Research. 2007;181:224-231. -
Brown EN, Ramaswamy S.
Quality of protein crystal structures. Acta Crystallographica Section D Biological Crystallography. 2007; 63: 941-50. -
Curtiss M, Colgan J.
The role of the T-cell costimulatory molecule Tim-1 in the immune response. Immunol Res. 2007;39(1-3):52-61. -
Ferraro DJ, Brown EN, Yu CL, Parales RE, Gibson DT, Ramaswamy S.
Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1. BMC Structural Biology. 2007; 7: 10. -
Yu CL, Liu W, Ferraro DJ, Brown EN, Parales JV, Ramaswamy S, Zylstra GJ, Gibson DT, Parales RE.
Purificiation, characterization, and crystallization of the components of a biphenyl dioxygenase system from Spingobium yanoikuyae B1. J Ind Mirobiol Biotechnol. 2007; 34: 331-24. -
Lu Y, Allen M, Halt AR, Weisenhaus M, Dallapiazza RF, Hall DD, Usachev YM, McKnight GS, Hell JW.
Age-dependent requirement of AKAP150-anchored PKA and GluR2-lacking AMPA receptors in LTP. EMBO J. 2007 Nov 1. -
Dickson, ME, Zimmerman MB, Rahmouni K, Sigmund CD.
The -20 and -217 promoter variants dominate differential angiotensinogen haplotype regulation in angiotensinogen-expressing cells. Hypertension. 2007; 49(3): 631-9. -
Jeronimo SMB, Duggal P, Ettinger NA, Nascimento ET, Monteiro G, Cabral AP, Pontes NN, Lacerda HG, Queiroz PV, Gomes CEM, Pearson RD, Blackwell JM, Beaty TH, Wilson ME.
Genetic Predisposition to Self-Curing Infection with the Protozoan Leishmania chagasi: A Genomewide Scan. J Infect Dis. 2007; 196(8):1261–9. -
Jeronimo SMB, Holst AK, Jamieson SE, Francis R, Martins DR, Bezerra FL, Ettinger NA, Nascimento ET, Monteiro GR, Lacerda HG, Miller EN, Cordell HJ, Duggal P, Beaty TH, Blackwell JM, Wilson ME.
Genes at human chromosome 5q31.1 regulate delayed-type hypersensitivity responses associated with Leishmania chagasi infection. Genes Immun. 2007; 8(7):539-51. -
Caldwell JC, Fineberg SK, Eberl DF.
Reduced ocelli Encodes the Leucine Rich Repeat Protein Pray for Elves in Drosophila melanogaster. Fly. 2007 May-Jun;1(3):146-52. -
McCray Jr. PB, Pewe L, Wohlford-Lenane1 C, Hickey M, Manzel L, Shi L, Netland J, Jia1 HP, Halabi CM, Sigmund CD, Meyerholz DK, Kirby P, Look DC, Perlman S.
Lethal infection in K18-hACE2 mice infected with SARS-CoV. Journal Virology. 2007; 81: 813-821. -
Zhou Y, Takahashi E, Li W, Halt A, Wiltgen B, Ehninger D, Li GD, Hell JW, Kennedy MB, Silva AJ.
Interactions between the NR2B receptor and CaMKII modulate synaptic plasticity and spatial learning. J Neurosci. 2007 Dec 12;27(50):13843-53. -
Zhang L,Jongeling AC, Hammond DL.
Suitability of the retrograde tracer Dil for electrophysiological studies of brainstem neurons: adverse ramifications for G-protein coupled receptor agonists. Journal of Neuroscience Methods. 2007 Feb; 160(1): 116-121. -
Michaelides M, Chen LL, Brantley MA Jr, Andorf JL, Isaak (Schindler) EM, Jenkins SA, Holder GE, Bird AC, Stone EM, Webster AR.
ABCA4 mutations and discordant ABCA4 alleles in patients and siblings with bull's-eye maculopathy. Br J Ophthalmol. 2007 Dec;91(12):1650-5. -
Schulert GS, Li L, Holt H, Allen LA.
Francisella tularensis targets protein kinase C-alpha to inhibit phagosome maturation. 2007 (submitted) -
Schwartz JT, Allen LA.
Role of urease in megasome formation and Helicobacter pylori survival in macrophages. J Leukoc Biol. 2006 Jun;79(6):1214-25. -
Sedore SC, Byers SA, Biglione S, Price JP, Maury WJ, Price DH.
Manipulation of P-TEFb control machinery by HIV: recruitment of P-TEFb from the large form by Tat and binding of HEXIM1 to TAR. Nucleic Acids Res. 2007; 35(13):4347-58. -
Sprague DL, Sowa JM, Elzey BD, Ratliff TL.
The role of platelet CD154 in the modulation in adaptive immunity. Immunol Res. 2007;39(1-3):185-93. -
Tabayoyong WB, Zavazava N.
Soluble HLA revisited. Leukemia Research. 2007;31(2):121-5. -
Kaveanaugh JS, Thoendel M, Horswill AR.
A role for type I signal peptidase in Staphylococcus aureus quorum sensing. Mol Microbiol. 2007 Aug;65(3):780-98. -
Wang SY, Racila E, Taylor RP, Weiner GJ.
NK cell activation and antibody dependent cellular cytotoxicity induced by rituximab-coated target cells is inhibited by the C3b component of complement. Blood. 2007 Nov 16; [Epub ahead of print] -
Marden JJ, Harraz MM, Williams AJ, Nelson K, Luo M, Paulson H and Engelhardt JF.
Redox modifier genes in amyotrophic lateral sclerosis in mice. J Clin Invest. 2007; 117: 2913-2919 -
Coryell MW, Ziemann AE, Westmoreland PJ, Haenfler JM, Kurjakovic Z, Zha XM, Price M, Schnizler MK, Wemmie JA.
Targeting ASIC1a Reduces Innate Fear and Alters Neuronal Activity in the Fear Circuit. Biol Psychiatry. 2007 Nov 15;62(10):1140-1148. Epub 2007 Jul 30.
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2006
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Allen BG, Weeks DL.
Using phiC31 integrase to make transgenic Xenopus laevis embryos. Nat Protoc. 2006;1(3):1248-57. -
Allen BG, Johnson M, Marsh AE, Dornfeld KJ.
Base excision repair of both uracil and oxidatively damaged bases contribute to thymidine deprivation-induced radiosensitization. Int J Radiat Oncol Biol Phys. 2006 Aug 1;65(5):1544-52.Allen, BG, Allen-Brady, K, Weeks, D.
Reduction of XNkx2-10 expression leads to anterior defects and malformation of the embryonic heart. Mech Dev. 2006 Oct;123(10):719-29. Epub 2006 Jul 26. -
Cirillo DJ, Wallace, RB, Wu L, Yood RA.
Effect of hormone therapy on risk of hip and knee joint replacement in the Women’s Health Initiative. Arthritis & Rheumatism. 2006;54(10), 3194-3204. -
Dickson ME, Sigmund CD.
Genetic Basis of Hypertension: Revisiting Angiotensinogen. Hypertension. 2006; 48(1): 14-20. -
Harper SQ, Staber PD, Beck CR, Fineberg SK, Stein C, Dalyz O and Davidson BL.
Optimization of Feline Immunodeficiency Virus Vectors for RNA interference. J of Virology. 2006 Oct;80(19):9371-80. -
Hummel SG, Fischer AJ, Martin SM, Schafer FQ, Buettner GR.
Nitric oxide as a cellular antioxidant: A little goes a long way. Free Radic Biol Med. 2006 Feb 1;40(3):501-6. Epub 2005 Nov 15. -
Khalsa SS, Moore SA, Van Hoesen GW.
Hughlings Jackson and the role of the entorhinal cortex in temporal lobe epilepsy: from patient A to Doctor Z. Epilepsy Behav. 2006;9:524-31. -
Schulert GS, Allen LA.
Differential infection of mononuclear phagocytes by Francisella tularensis: Role of the macrophage mannose receptor. J. Leukoc. Biol. 2006; 80: 563-571. -
Elzey BD, Sprague DL, Ratliff TL.
The emerging role of platelets in adaptive immunity. Cell Immunol. 2005 Nov;238(1):1-9. Epub 2006 Jan 26. -
Butler N, Pewe L, Trandem K, Perlman S.
Murine encephalitis caused by HCoV-OC43, a human coronavirus with broad species specificity, is partly immune-mediated. Virology. 2006 Apr 10;347(2):410-21. Epub 2006 Jan 18. PMID: 164130. -
Bowles JA, Wang SY, Link BK, Allan B, Beuerlein G, Campbell MA, Marquis D, Ondek B, Wooldridge JE, Smith BJ, Breitmeyer JB, Weiner GJ.
Anti-CD20 monoclonal antibody with enhanced affinity for CD16 activates NK cells at lower concentrations and more effectively than rituximab. Blood. 2006 Oct 15;108(8):2648-54. Epub 2006 Jul 6.