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University of Iowa Diagnostic Laboratories (UIDL) Test Directory 319-384-7212 (local) 1-866-844-2522 (toll free) |
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| POMT1 Sequencing | Order Code: POMT1
Order Form: Muscular Dystrophy Molecular Genetics Requisition |
Specimen: |
Whole Blood | ||
Collection Medium: |
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Minimum: |
Adult minimum: 3 mL whole blood in lavendar top (EDTA) tube. Children minimum: 2 mL whole blood in lavendar top (EDTA) tube. Optional specimen type: Formalin Fixed paraffin embedded tissue; Fresh Frozen tissue. Testing on smaller volumes than those requested will be attempted. However, in some cases, small blood volumes may compromise the ability to perform testing. | ||
Rejection Criteria: |
Testing requires a dedicated collection tube. | ||
Testing Schedule: |
Weekly | ||
Analytic Time: |
21 days | ||
Reference Range: |
Normal | ||
Comments: |
Mutations in the protein O-mannosyltransferases-1 gene (POMT1, OMIM #607423) cause disorders in the dystroglycanopathy spectrum, all with autosomal recessive inheritance. At the severe side of the spectrum is Walker-Warburg syndrome (WWS, OMIM # 236670) a congenital muscular dystrophy associated with defects in neuronal migration that produce complex brain and eye abnormalities. At the less severe side of the spectrum is autosomal recessive limb-girdle muscular dystrophy type 2K (LGMD2K, OMIM #609308). | ||
Methodology: |
PCR followed by sequence analysis of the coding regions of the POMT1 gene. | ||
Sample Processing: |
Lavender tube is sent as whole blood, no processing necessary. | ||
Sample Storage: |
Room temperature for up to 24 hours, then refrigerate the whole blood if it is necessary to be held overnight, or weekends, or holidays. | ||
Transport Instructions: |
Place specimen into styrofoam container, seal container. DO NOT FREEZE, protect specimen by wrapping in bubble-wrap or toweling. Recommend express mail or equivalent if not on courier service. | ||
CPT Code: |
83904(x12), 83898(x12), 83890, 83912-26; if paraffin block or fresh tissue is submitted, remove CPT code 83890 and add 83907. |
Updated: 06/06/2008